Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6(T))

Zeytun, Ahmet and Sikorski, Johannes and Nolan, Matt and Lapidus, Alla and Lucas, Susan and Han, James and Tice, Hope and Cheng, Jan-Fang and Tapia, Roxanne and Goodwin, Lynne and Pitluck, Sam and Liolios, Konstantinos and Ivanova, Natalia and Mavromatis, Konstantinos and Mikhailova, Natalia and Ovchinnikova, Galina and Pati, Amrita and Chen, Amy and Palaniappan, Krishna and Ngatchou-Djao, Olivier D. and Land, Miriam and Hauser, Loren and Jeffries, Cynthia D. and Han, Cliff and Detter, John C. and Uebler, Susanne and Rohde, Manfred and Tindall, Brian J. and Goeker, Markus and Wirth, Reinhard and Woyke, Tanja and Bristow, James and Eisen, Jonathan A. and Markowitz, Victor and Hugenholtz, Philip and Klenk, Hans-Peter and Kyrpides, Nikos C. (2011) Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6(T)). STANDARDS IN GENOMIC SCIENCES, 4 (2). pp. 131-143. ISSN 1944-3277,

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Abstract

Hydrogenobacter thermophilus Kawasumi et al. 1984 is the type species of the genus Hydrogenobacter. H. thermophilus was the first obligate autotrophic organism reported among aerobic hydrogen-oxidizing bacteria. Strain TK-6(T) is of interest because of the unusually efficient hydrogen-oxidizing ability of this strain, which results in a faster generation time compared to other autotrophs. It is also able to grow anaerobically using nitrate as an electron acceptor when molecular hydrogen is used as the energy source, and able to aerobically fix CO2 via the reductive tricarboxylic acid cycle. This is the fifth completed genome sequence in the family Aquificaceae, and the second genome sequence determined from a strain derived from the original isolate. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,742,932 bp long genome with its 1,899 protein-coding and 49 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Item Type: Article
Uncontrolled Keywords: TRICARBOXYLIC-ACID CYCLE; OXIDIZING BACTERIUM; SP-NOV; GENUS HYDROGENOBACTER; ELEMENTAL SULFUR; AQUIFICALES; ARCHAEA; GROWTH; 2-METHYLTHIO-1,4-NAPHTHOQUINONE; PURIFICATION; strictly thermophilic; obligately chemolithoautotrophic; Gram-negative; aerobic; hydrogen-oxidizing; nonmotile; non sporeforming; rod shaped; Aquificaceae; Aquificae; GE-BA
Subjects: 500 Science > 570 Life sciences
Divisions: Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum) > Prof. Dr. Reinhard Wirth
Depositing User: Dr. Gernot Deinzer
Date Deposited: 06 Jul 2020 06:19
Last Modified: 06 Jul 2020 06:19
URI: https://pred.uni-regensburg.de/id/eprint/21691

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