Complete genome sequence of Oceanithermus profundus type strain (506(T))

Pati, Amrita and Zhang, Xiaojing and Lapidus, Alla and Nolan, Matt and Lucas, Susan and Del Rio, Tijana Glavina and Tice, Hope and Cheng, Jan-Fang and Tapia, Roxane and Han, Cliff and Goodwin, Lynne and Pitluck, Sam and Liolios, Konstantinos and Pagani, Ioanna and Ivanova, Natalia and Mavromatis, Konstantinos and Chen, Amy and Palaniappan, Krishna and Hauser, Loren and Jeffries, Cynthia D. and Brambilla, Evelyne-Marie and Roehl, Alina and Mwirichia, Romano and Rohde, Manfred and Tindall, Brian J. and Sikorski, Johannes and Wirth, Reinhard and Goeker, Markus and Woyke, Tanja and Detter, John C. and Bristow, James and Eisen, Jonathan A. and Markowitz, Victor and Hugenholtz, Philip and Kyrpides, Nikos C. and Klenk, Hans-Peter and Land, Miriam (2011) Complete genome sequence of Oceanithermus profundus type strain (506(T)). STANDARDS IN GENOMIC SCIENCES, 4 (2). pp. 210-220. ISSN 1944-3277,

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Abstract

Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Item Type: Article
Uncontrolled Keywords: EXTREMELY RADIATION-RESISTANT; FATTY-ACID-COMPOSITION; GEN. NOV.; SP. NOV.; THERMOPHILIC BACTERIUM; THERMUS-AQUATICUS; CLASSIFICATION; ALGORITHM; DATABASE; ARCHAEA; microaerophilic; non-motile; Gram-negative; nitrate-reducing; moderate thermophilic; neutrophilic; chemolithoheterotrophic; hydrothermal vent; Thermaceae; GEBA
Subjects: 500 Science > 570 Life sciences
Divisions: Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum)
Depositing User: Dr. Gernot Deinzer
Date Deposited: 02 Jul 2020 12:08
Last Modified: 02 Jul 2020 12:08
URI: https://pred.uni-regensburg.de/id/eprint/21693

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