Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))

Anderson, Iain and Goeker, Markus and Nolan, Matt and Lucas, Susan and Hammon, Nancy and Deshpande, Shweta and Cheng, Jan-Fang and Tapia, Roxanne and Han, Cliff and Goodwin, Lynne and Pitluck, Sam and Huntemann, Marcel and Liolios, Konstantinos and Ivanova, Natalia and Pagani, Ioanna and Mavromatis, Konstantinos and Ovchinikova, Galina and Pati, Amrita and Chen, Amy and Palaniappan, Krishna and Land, Miriam and Hauser, Loren and Brambilla, Evelyne-Marie and Huber, Harald and Yasawong, Montri and Rohde, Manfred and Spring, Stefan and Abt, Birte and Sikorski, Johannes and Wirth, Reinhard and Detter, John C. and Woyke, Tanja and Bristow, James and Eisen, Jonathan A. and Markowitz, Victor and Hugenholtz, Philip and Kyrpides, Nikos C. and Klenk, Hans-Peter and Lapidus, Alla (2011) Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)). STANDARDS IN GENOMIC SCIENCES, 4 (3). pp. 381-392. ISSN 1944-3277,

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Abstract

Pyrolobus fumarii Blochl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and because it is a hyperthermophilic chemolithoautotroph known as the primary producer of organic matter at deep-sea hydrothermal vents. P. fumarii exhibits currently the highest optimal growth temperature of all life forms on earth (106 degrees C). This is the first completed genome sequence of a member of the genus Pyrolobus to be published and only the second genome sequence from a member of the family Pyrodictiaceae. Although Diversa Corporation announced the completion of sequencing of the P. fumarii genome on September 25, 2001, this sequence was never released to the public. The 1,843,267 bp long genome with its 1,986 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Item Type: Article
Uncontrolled Keywords: UPPER TEMPERATURE LIMIT; TRANSFER-RNA; IN-VITRO; ARCHAEA; BACTERIA; ALGORITHM; DATABASE; SYSTEM; GRAPHS; LIFE; hyperthermophile; chemolithoautotroph; facultative microaerophilic; non-motile; hydrothermal solfataric vents; black smoker; Pyrodictiaceae; GEBA
Subjects: 500 Science > 570 Life sciences
Divisions: Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum)
Depositing User: Dr. Gernot Deinzer
Date Deposited: 02 Jul 2020 12:09
Last Modified: 02 Jul 2020 12:11
URI: https://pred.uni-regensburg.de/id/eprint/21694

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