Budde, Kathrin and Goek, Oemer-Necmi and Pietzner, Maik and Meisinger, Christine and Leitzmann, Michael and Nauck, Matthias and Koettgen, Anna and Friedrich, Nele (2016) Quality assurance in the pre-analytical phase of human urine samples by H-1 NMR spectroscopy. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 589. pp. 10-17. ISSN 0003-9861, 1096-0384
Full text not available from this repository. (Request a copy)Abstract
Metabolomic approaches investigate changes in metabolite profiles, which may reflect changes in metabolic pathways and provide information correlated with a specific biological process or pathophysiology. High-resolution H-1 NMR spectroscopy is used to identify metabolites in biofluids and tissue samples qualitatively and quantitatively. This pre-analytical study evaluated the effects of storage time and temperature on H-1 NMR spectra from human urine in two settings. Firstly, to evaluate short time effects probably due to acute delay in sample handling and secondly, the effect of prolonged storage up to one month to find markers of sample miss-handling. A number of statistical procedures were used to assess the differences between samples stored under different conditions, including Projection to Latent Structure Discriminant Analysis (PLS-DA), non-parametric testing as well as mixed effect linear regression analysis. The results indicate that human urine samples can be stored at 10 degrees C for 24 h or at -80 degrees C for 1 month, as no relevant changes in H-1 NMR fingerprints were observed during these time periods and temperature conditions. However, some metabolites most likely of microbial origin showed alterations during prolonged storage but without facilitating classification. In conclusion, the presented protocol for urine sample handling and semi-automatic metabolite quantification is suitable for large-scale epidemiological studies. (C) 2015 Elsevier Inc. All rights reserved.
| Item Type: | Article |
|---|---|
| Uncontrolled Keywords: | MAGNETIC-RESONANCE-SPECTROSCOPY; PATTERN-RECOGNITION; METABONOMICS; STORAGE; METABOLOMICS; METABOLISM; PLASMA; MS; IDENTIFICATION; COLLECTION; H-1 NMR spectroscopy; Preanalytic; Quality assurance; Metabolome |
| Subjects: | 600 Technology > 610 Medical sciences Medicine |
| Divisions: | Medicine > Institut für Epidemiologie und Präventivmedizin |
| Depositing User: | Dr. Gernot Deinzer |
| Date Deposited: | 01 Mar 2019 12:36 |
| Last Modified: | 07 Mar 2019 09:35 |
| URI: | https://pred.uni-regensburg.de/id/eprint/2220 |
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