NMR in the SPINE structural proteomics project

Ab, E. and Atkinson, A. R. and Banci, L. and Bertini, I. and Ciofi-Baffoni, S. and Brunner, K. and Diercks, T. and Doetsch, V. and Engelke, F. and Folkers, G. E. and Griesinger, C. and Gronwald, W. and Guenther, U. and Habeck, M. and de Jong, R. N. and Kalbitzer, H. R. and Kieffer, B. and Leeflang, B. R. and Loss, S. and Luchinat, C. and Marquardsen, T. and Moskau, D. and Neidig, K. -P. and Nilges, M. and Piccioli, M. and Pierattelli, R. and Rieping, W. and Schippmann, T. and Schwalbe, H. and Trave, G. and Trenner, J. and Woehnert, J. and Zweckstetter, M. and Kaptein, R. (2006) NMR in the SPINE structural proteomics project. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 62. pp. 1150-1161. ISSN 0907-4449,

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Abstract

This paper describes the developments, role and contributions of the NMR spectroscopy groups in the Structural Proteomics In Europe ( SPINE) consortium. Focusing on the development of high- throughput ( HTP) pipelines for NMR structure determinations of proteins, all aspects from sample preparation, data acquisition, data processing, data analysis to structure determination have been improved with respect to sensitivity, automation, speed, robustness and validation. Specific highlights are protonless C-13-direct detection methods and inferential structure determinations ( ISD). In addition to technological improvements, these methods have been applied to deliver over 60 NMR structures of proteins, among which are five that failed to crystallize. The inclusion of NMR spectroscopy in structural proteomics pipelines improves the success rate for protein structure determinations.

Item Type: Article
Uncontrolled Keywords: PROTEIN-BACKBONE ASSIGNMENT; NUCLEOTIDE EXCISION-REPAIR; COPPER TRAFFICKING PROTEIN; AUTOMATED NOE ASSIGNMENT; HUMAN BETA-PARVALBUMIN; CYTOCHROME-C-OXIDASE; SOLID-STATE NMR; PARAMAGNETIC PROTEINS; EFFICIENT STRATEGY; ALPHA-PARVALBUMIN;
Subjects: 500 Science > 570 Life sciences
Divisions: Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie
Depositing User: Dr. Gernot Deinzer
Date Deposited: 20 Jan 2021 11:09
Last Modified: 20 Jan 2021 11:09
URI: https://pred.uni-regensburg.de/id/eprint/33897

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