A principal component meta-analysis on multiple anthropometric traits identifies novel loci for body shape

Ried, Janina S. and Jeff, Janina M. and Chu, Audrey Y. and Bragg-Gresham, Jennifer L. and van Dongen, Jenny and Huffman, Jennifer E. and Ahluwalia, Tarunveer S. and Cadby, Gemma and Eklund, Niina and Eriksson, Joel and Esko, Tonu and Feitosa, Mary F. and Goel, Anuj and Gorski, Mathias and Hayward, Caroline and Heard-Costa, Nancy L. and Jackson, Anne U. and Jokinen, Eero and Kanoni, Stavroula and Kristiansson, Kati and Kutalik, Zoltan and Lahti, Jari and Luan, Jian'an and Maegi, Reedik and Mahajan, Anubha and Mangino, Massimo and Medina-Gomez, Carolina and Monda, Keri L. and Nolte, Ilja M. and Perusse, Louis and Prokopenko, Inga and Qi, Lu and Rose, Lynda M. and Salvi, Erika and Smith, Megan T. and Snieder, Harold and Stancakova, Alena and Sung, Yun Ju and Tachmazidou, Ioanna and Teumer, Alexander and Thorleifsson, Gudmar and van der Harst, Pim and Walker, Ryan W. and Wang, Sophie R. and Wild, Sarah H. and Willems, Sara M. and Wong, Andrew and Zhang, Weihua and Albrecht, Eva and Alves, Alexessander Couto and Bakker, Stephan J. 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Carola and Boomsma, Dorret I. and Bouchard, Claude and Chambers, John C. and Chasman, Daniel I. and Cusi, Daniele and Gansevoort, Ron T. and Gieger, Christian and Hansen, Torben and Hicks, Andrew A. and Hu, Frank and Hveem, Kristian and Jarvelin, Marjo-Riitta and Kajantie, Eero and Kooner, Jaspal S. and Kuh, Diana and Kuusisto, Johanna and Laakso, Markku and Lakka, Timo A. and Lehtimaeki, Terho and Metspalu, Andres and Njolstad, Inger and Ohlsson, Claes and Oldehinkel, Albertine J. and Palmer, Lyle J. and Pedersen, Oluf and Perola, Markus and Peters, Annette and Psaty, Bruce M. and Puolijoki, Hannu and Rauramaa, Rainer and Rudan, Igor and Salomaa, Veikko and Schwarz, Peter E. H. and Shudiner, Alan R. and Smit, Jan H. and Sorensen, Thorkild I. A. and Spector, Timothy D. and Stefansson, Kari and Stumvoll, Michael and Tremblay, Angelo and Tuomilehto, Jaakko and Uitterlinden, Andre G. and Uusitupa, Matti and Voelker, Uwe and Vollenweider, Peter and Wareham, Nicholas J. and Watkins, Hugh and Wilson, James F. and Zeggini, Eleftheria and Abecasis, Goncalo R. and Boehnke, Michael and Borecki, Ingrid B. and Deloukas, Panos and van Duijn, Cornelia M. and Fox, Caroline and Groop, Leif C. and Heid, Iris M. and Hunter, David J. and Kaplan, Robert C. and McCarthy, Mark I. and North, Kari E. and O'Connell, Jeffrey R. and Schlessinger, David and Thorsteinsdottir, Unnur and Strachan, David P. and Frayling, Timothy and Hirschhorn, Joel N. and Mueller-Nurasyid, Martina and Loos, Ruth J. F. (2016) A principal component meta-analysis on multiple anthropometric traits identifies novel loci for body shape. NATURE COMMUNICATIONS, 7: 13357. ISSN 2041-1723,

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Abstract

Large consortia have revealed hundreds of genetic loci associated with anthropometric traits, one trait at a time. We examined whether genetic variants affect body shape as a composite phenotype that is represented by a combination of anthropometric traits. We developed an approach that calculates averaged PCs (AvPCs) representing body shape derived from six anthropometric traits (body mass index, height, weight, waist and hip circumference, waist-to-hip ratio). The first four AvPCs explain >99% of the variability, are heritable, and associate with cardiometabolic outcomes. We performed genome-wide association analyses for each body shape composite phenotype across 65 studies and meta-analysed summary statistics. We identify six novel loci: LEMD2 and CD47 for AvPC1, RPS6KA5/C14orf159 and GANAB for AvPC3, and ARL15 and ANP32 for AvPC4. Our findings highlight the value of using multiple traits to define complex phenotypes for discovery, which are not captured by single-trait analyses, and may shed light onto new pathways.

Item Type: Article
Uncontrolled Keywords: GENOME-WIDE ASSOCIATION; DIET-INDUCED OBESITY; MASS INDEX; DISEASE ASSOCIATIONS; FAT DISTRIBUTION; EARLY-ONSET; HIP RATIO; RESOURCE; BIOLOGY; HEIGHT;
Subjects: 600 Technology > 610 Medical sciences Medicine
Divisions: Medicine > Abteilung für Nephrologie
Medicine > Institut für Epidemiologie und Präventivmedizin
Depositing User: Dr. Gernot Deinzer
Date Deposited: 12 Apr 2019 10:06
Last Modified: 12 Apr 2019 10:06
URI: https://pred.uni-regensburg.de/id/eprint/3935

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