Towards Photochromic Azobenzene-Based Inhibitors for Tryptophan Synthase

Simeth, Nadja A. and Kinateder, Thomas and Rajendran, Chitra and Nazet, Julian and Merkl, Rainer and Sterner, Reinhard and Koenig, Burkhard and Kneuttinger, Andrea C. (2021) Towards Photochromic Azobenzene-Based Inhibitors for Tryptophan Synthase. CHEMISTRY-A EUROPEAN JOURNAL, 27. pp. 2439-2451. ISSN 0947-6539, 1521-3765

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Abstract

Light regulation of drug molecules has gained growing interest in biochemical and pharmacological research in recent years. In addition, a serious need for novel molecular targets of antibiotics has emerged presently. Herein, the development of a photocontrollable, azobenzene-based antibiotic precursor towards tryptophan synthase (TS), an essential metabolic multienzyme complex in bacteria, is presented. The compound exhibited moderately strong inhibition of TS in its E configuration and five times lower inhibition strength in its Z configuration. A combination of biochemical, crystallographic, and computational analyses was used to characterize the inhibition mode of this compound. Remarkably, binding of the inhibitor to a hitherto-unconsidered cavity results in an unproductive conformation of TS leading to noncompetitive inhibition of tryptophan production. In conclusion, we created a promising lead compound for combatting bacterial diseases, which targets an essential metabolic enzyme, and whose inhibition strength can be controlled with light.

Item Type: Article
Uncontrolled Keywords: ALPHA(2)BETA(2) COMPLEX; 3-DIMENSIONAL STRUCTURE; ANTIBACTERIAL ACTIVITY; ALLOSTERIC REGULATION; CRYSTAL-STRUCTURES; ESCHERICHIA-COLI; OPTICAL CONTROL; ACTIVE-SITES; IN-VIVO; COMMUNICATION; antibiotics; azo compounds; enzymes; inhibitors; photopharmacology
Subjects: 500 Science > 540 Chemistry & allied sciences
Divisions: Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Reinhard Sterner
Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Rainer Merkl
Chemistry and Pharmacy > Institut für Organische Chemie > Lehrstuhl Prof. Dr. Burkhard König
Depositing User: Petra Gürster
Date Deposited: 21 Apr 2021 14:31
Last Modified: 21 Apr 2021 14:31
URI: https://pred.uni-regensburg.de/id/eprint/43106

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