CELL-FREE TRANSCRIPTION OF THE NIFH1 GENE OF METHANOCOCCUS-THERMOLITHOTROPHICUS INDICATES THAT PROMOTERS OF ARCHAEAL NIF GENES SHARE BASIC FEATURES WITH THE METHANOGEN CONSENSUS PROMOTER

GOHL, HP and HAUSNER, W and THOMM, M (1992) CELL-FREE TRANSCRIPTION OF THE NIFH1 GENE OF METHANOCOCCUS-THERMOLITHOTROPHICUS INDICATES THAT PROMOTERS OF ARCHAEAL NIF GENES SHARE BASIC FEATURES WITH THE METHANOGEN CONSENSUS PROMOTER. MOLECULAR & GENERAL GENETICS, 231 (2). pp. 286-295. ISSN 0026-8925,

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Abstract

The nifH1 gene of Methanococcus thermolithotrophicus, which encodes the putative dinitrogenase reductase of an archaeon, was accurately transcribed in a homologous cell-free transcription system. Extracts of cells grown with N2 or ammonia as nitrogen source initated transcription at the nifH1 promoter with similar efficiencies. We confirmed that cells grown under non-N2-fixing conditions do not contain significant amounts of nifH1-specific mRNA. The levels of cell-free transcription initiation at the nifH1 promoter wer similar to those observed at a tRNA promoter. The DNA sequence from -40 to +5 relative to the initiator nucleotide of nifH1 mRNA contained all the information required for promoter activity. A mutational analysis of this section of DNA demonstrated that a TATA box at -25 and the TTGT motif (initiator element) at the transcription start site are essential for cell-free transcription. These elements are similar to the structural determinants of a known tRNA promoter of Methanococcus. Mutation of a sequence, showing homology to the bacterial NifA site, which overlaps the transcription start site, did not affect promoter activity. Hence, cell-free transcription of the Methanococcus nifH1 gene is independent of upstream activator elements and does not require alternate cis-acting sequences that differ from the methanogen consensus promoter. These findings suggest that the activation of nif promoters is brought about by fundamentally different mechanisms in Archaea and bacteria.

Item Type: Article
Uncontrolled Keywords: NITROGENASE STRUCTURAL GENES; STABLE RNA GENES; KLEBSIELLA-PNEUMONIAE; ARCHAEBACTERIAL PROMOTER; FIXATION GENES; TATA BOX; SEQUENCES; INVITRO; EXPRESSION; POLYMERASE; ARCHAEA; NITROGEN FIXATION; NIFH PROMOTER; CELL-FREE TRANSCRIPTION; METHANOCOCCUS
Depositing User: Dr. Gernot Deinzer
Last Modified: 19 Oct 2022 08:44
URI: https://pred.uni-regensburg.de/id/eprint/54722

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