A Next-Generation qPlus-Sensor-Based AFM Setup: Resolving Archaeal S-Layer Protein Structures in Air and Liquid

Seeholzer, Theresa and Tarau, Daniela and Hollendonner, Lea and Auer, Andrea and Rachel, Reinhard and Grohmann, Dina and Giessibl, Franz J. and Weymouth, Alfred J. (2023) A Next-Generation qPlus-Sensor-Based AFM Setup: Resolving Archaeal S-Layer Protein Structures in Air and Liquid. JOURNAL OF PHYSICAL CHEMISTRY B, 127 (31). pp. 6949-6957. ISSN 1520-6106, 1520-5207

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Abstract

Surface-layer (S-layer) proteins form the outermost envelopeinmany bacteria and most archaea and arrange in two-dimensional quasicrystallinestructures via self-assembly. We investigated S-layer proteins extractedfrom the archaeon Pyrobaculum aerophilium with aqPlus sensor-based atomic force microscope (AFM) in both liquid andambient conditions and compared it to transmission electron microscopy(TEM) images under vacuum conditions. For AFM scanning, a next-generationliquid cell and a new protocol for creating long and sharp sapphiretips was introduced. Initial AFM images showed only layers of residualdetergent molecules (sodium dodecyl sulfate, SDS), which are usedto isolate the S-layer proteins from the cells. SDS was not visiblein the TEM images, requiring more thorough sample preparation forAFM measurements. These improvements allowed us to resolve the crystallikestructure of the S-layer samples with frequency-modulation AFM inboth air and liquid.

Item Type: Article
Uncontrolled Keywords: ATOMIC-FORCE MICROSCOPY; RESOLUTION; DEPOSITION; SURFACES; LATTICES; KIT
Subjects: 500 Science > 530 Physics
500 Science > 570 Life sciences
Divisions: Physics > Institute of Experimental and Applied Physics > Chair Professor Giessibl > Group Franz J. Giessibl
Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum) > Prof. Dr. Reinhard Rachel
Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum) > Prof. Dr. Dina Grohmann
Depositing User: Dr. Gernot Deinzer
Date Deposited: 21 Feb 2024 07:48
Last Modified: 21 Feb 2024 07:48
URI: https://pred.uni-regensburg.de/id/eprint/58881

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